Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_12616 | Not Available | Positive | 4354910 - 4355800 | 32962.2 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05421747_12617 | Not Available | Positive | 4355821 - 4357014 | 43788.2 |
| fasciclin domain-containing protein | SAMN05421747_12618 | Not Available | Positive | 4357064 - 4358491 | 53971.9 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05421747_12619 | Not Available | Positive | 4358512 - 4359537 | 37517.8 |
| hypothetical protein | SAMN05421747_12620 | Not Available | Positive | 4359644 - 4359802 | 5519.69 |
| rhs repeat-associated core domain-containing protein | SAMN05421747_1271 | Not Available | Positive | 4360076 - 4361887 | 65936.1 |
| hypothetical protein | SAMN05421747_1272 | Not Available | Positive | 4361889 - 4362233 | 13282.9 |
| hypothetical protein | SAMN05421747_1273 | Not Available | Positive | 4362209 - 4362658 | 16746.2 |
| hypothetical protein | SAMN05421747_1274 | Not Available | Negative | 4362549 - 4362806 | 9289.92 |
| hypothetical protein | SAMN05421747_1275 | Not Available | Positive | 4363064 - 4363921 | 33099.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
