Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate adenylyltransferase | SAMN05421747_12432 | Not Available | Positive | 4299552 - 4300823 | 46976.1 |
| trna modification gtpase | SAMN05421747_12433 | Not Available | Positive | 4300843 - 4302204 | 49627.7 |
| hypothetical protein | SAMN05421747_12434 | Not Available | Positive | 4302259 - 4302396 | 5681.92 |
| site-specific recombinase xerd | SAMN05421747_12435 | Not Available | Positive | 4302380 - 4303507 | 44281.4 |
| hypothetical protein | SAMN05421747_12436 | Not Available | Positive | 4303511 - 4304362 | 33523.9 |
| dna binding domain-containing protein, excisionase family | SAMN05421747_12437 | Not Available | Positive | 4304433 - 4304786 | 13450.5 |
| virulence-associated protein e | SAMN05421747_12438 | Not Available | Positive | 4304898 - 4306097 | 46928.8 |
| hypothetical protein | SAMN05421747_12439 | Not Available | Positive | 4306194 - 4306412 | 8491.58 |
| hypothetical protein | SAMN05421747_1251 | Not Available | Negative | 4306834 - 4307274 | 16042.0 |
| hypothetical protein | SAMN05421747_1252 | Not Available | Positive | 4307505 - 4307975 | 17450.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
