Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_12422 | Not Available | Negative | 4287353 - 4287751 | 15521.7 |
| antirestriction protein | SAMN05421747_12423 | Not Available | Negative | 4287908 - 4288540 | 24693.2 |
| hypothetical protein | SAMN05421747_12424 | Not Available | Positive | 4288933 - 4289094 | 6111.66 |
| Tmrna,resume consensus sequence (at 89): tacaaatggcgaagaaaa | Not Available | Not Available | Positive | 4290656 - 4291022 | Not Available |
| histidinol dehydrogenase | SAMN05421747_12426 | Not Available | Negative | 4291091 - 4292386 | 46184.1 |
| atp phosphoribosyltransferase | SAMN05421747_12427 | Not Available | Negative | 4292387 - 4293238 | 30822.5 |
| hypothetical protein | SAMN05421747_12428 | Not Available | Positive | 4293430 - 4293534 | 3933.79 |
| alpha-glucosidase | SAMN05421747_12429 | Not Available | Positive | 4293599 - 4296055 | 95241.0 |
| 1,4-alpha-glucan branching enzyme | SAMN05421747_12430 | Not Available | Positive | 4296082 - 4298094 | 77063.1 |
| starch synthase | SAMN05421747_12431 | Not Available | Positive | 4298101 - 4299549 | 54831.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
