Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteroides conjugative transposon traj protein | SAMN05421747_12412 | Not Available | Positive | 4280222 - 4281217 | 36746.1 |
| bacteroides conjugative transposon trak protein | SAMN05421747_12413 | Not Available | Positive | 4281231 - 4281854 | 24037.7 |
| hypothetical protein | SAMN05421747_12414 | Not Available | Positive | 4281865 - 4282293 | 15895.2 |
| hypothetical protein | SAMN05421747_12415 | Not Available | Positive | 4282307 - 4282594 | 11060.4 |
| bacteroides conjugative transposon tram protein | SAMN05421747_12416 | Not Available | Positive | 4282581 - 4283906 | 48703.9 |
| bacteroides conjugative transposon tran protein | SAMN05421747_12417 | Not Available | Positive | 4284008 - 4284910 | 33942.9 |
| conjugative transposon protein trao | SAMN05421747_12418 | Not Available | Positive | 4284931 - 4285485 | 20552.8 |
| protein of unknown function | SAMN05421747_12419 | Not Available | Positive | 4285498 - 4285944 | 17534.9 |
| hypothetical protein | SAMN05421747_12420 | Not Available | Positive | 4286049 - 4286321 | 10304.7 |
| two-component system, narl family, response regulator degu | SAMN05421747_12421 | Not Available | Positive | 4286678 - 4287121 | 16381.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
