Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_1242 | Not Available | Positive | 4271512 - 4272150 | 23706.8 |
| hypothetical protein | SAMN05421747_1243 | Not Available | Negative | 4272172 - 4272981 | 31608.9 |
| uncharacterized protein yydd, contains duf2326 domain | SAMN05421747_1244 | Not Available | Negative | 4272982 - 4274757 | 69508.6 |
| hypothetical protein | SAMN05421747_1245 | Not Available | Negative | 4274747 - 4274995 | 9457.42 |
| hypothetical protein | SAMN05421747_1246 | Not Available | Negative | 4275034 - 4275900 | 33763.0 |
| hypothetical protein | SAMN05421747_1247 | Not Available | Positive | 4275929 - 4276093 | 6579.06 |
| protein of unknown function | SAMN05421747_1248 | Not Available | Positive | 4276410 - 4276715 | 10637.0 |
| protein of unknown function | SAMN05421747_1249 | Not Available | Positive | 4276727 - 4277059 | 12214.5 |
| bacteroides conjugation system atpase, trag family | SAMN05421747_12410 | Not Available | Positive | 4277056 - 4279563 | 95987.2 |
| protein of unknown function | SAMN05421747_12411 | Not Available | Positive | 4279586 - 4280218 | 23847.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
