Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_12360 | Not Available | Negative | 4265908 - 4266153 | 9274.41 |
| hypothetical protein | SAMN05421747_12361 | Not Available | Negative | 4266150 - 4266860 | 26774.2 |
| hypothetical protein | SAMN05421747_12362 | Not Available | Negative | 4266879 - 4267385 | 19256.6 |
| zn-dependent peptidase imma, m78 family | SAMN05421747_12363 | Not Available | Negative | 4267394 - 4268452 | 40449.0 |
| hypothetical protein | SAMN05421747_12364 | Not Available | Positive | 4268742 - 4269011 | 10093.2 |
| patatin-like phospholipase | SAMN05421747_12365 | Not Available | Positive | 4269019 - 4270038 | 38298.6 |
| hypothetical protein | SAMN05421747_12366 | Not Available | Positive | 4270040 - 4270429 | 15216.9 |
| hypothetical protein | SAMN05421747_12367 | Not Available | Positive | 4270495 - 4270953 | 17369.6 |
| putative transposase | SAMN05421747_12368 | Not Available | Negative | 4270961 - 4271113 | 5675.45 |
| protein of unknown function | SAMN05421747_1241 | Not Available | Positive | 4271234 - 4271509 | 10490.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
