Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05421747_12340 | Not Available | Negative | 4246413 - 4246970 | 21113.8 |
| protein of unknown function | SAMN05421747_12341 | Not Available | Positive | 4247115 - 4247402 | 10171.3 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421747_12342 | Not Available | Positive | 4247448 - 4248986 | 56588.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_12343 | Not Available | Positive | 4248979 - 4249926 | 35857.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_12344 | Not Available | Positive | 4249927 - 4250994 | 40092.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_12345 | Not Available | Positive | 4250991 - 4252196 | 43986.1 |
| o-antigen ligase | SAMN05421747_12346 | Not Available | Positive | 4252183 - 4253370 | 44775.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_12347 | Not Available | Positive | 4253370 - 4254380 | 37937.1 |
| parallel beta-helix repeat (two copies) | SAMN05421747_12348 | Not Available | Positive | 4254367 - 4255920 | 55792.9 |
| rhamnosyltransferase | SAMN05421747_12349 | Not Available | Positive | 4255920 - 4256849 | 34270.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
