Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05421747_12276 | Not Available | Positive | 4206613 - 4208052 | 53785.2 |
| hypothetical protein | SAMN05421747_1231 | Not Available | Positive | 4208341 - 4208808 | 17266.1 |
| hypothetical protein | SAMN05421747_1232 | Not Available | Negative | 4208972 - 4209742 | 28918.6 |
| hypothetical protein | SAMN05421747_1233 | Not Available | Negative | 4209768 - 4211726 | 74033.2 |
| arsenate reductase | SAMN05421747_1234 | Not Available | Negative | 4211771 - 4212115 | 13142.6 |
| dna polymerase-3 subunit gamma/tau | SAMN05421747_1235 | Not Available | Positive | 4212302 - 4214236 | 71818.7 |
| hypothetical protein | SAMN05421747_1236 | Not Available | Negative | 4214311 - 4215054 | 27924.2 |
| restriction endonuclease | SAMN05421747_1237 | Not Available | Negative | 4215059 - 4215931 | 33054.1 |
| dinb superfamily protein | SAMN05421747_1238 | Not Available | Positive | 4216021 - 4216464 | 17371.8 |
| hypothetical protein | SAMN05421747_1239 | Not Available | Positive | 4216527 - 4216766 | 9043.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
