Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_12236 | Not Available | Negative | 4172266 - 4173261 | 36963.4 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05421747_12237 | Not Available | Negative | 4173305 - 4174108 | 30561.2 |
| hypothetical protein | SAMN05421747_12238 | Not Available | Negative | 4174120 - 4176309 | 81134.4 |
| hypothetical protein | SAMN05421747_12239 | Not Available | Negative | 4176321 - 4178750 | 89078.2 |
| exodeoxyribonuclease-3 | SAMN05421747_12240 | Not Available | Negative | 4178778 - 4179689 | 34655.0 |
| starch-binding associating with outer membrane | SAMN05421747_12241 | Not Available | Negative | 4179667 - 4181148 | 57142.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_12242 | Not Available | Negative | 4181182 - 4184610 | 127617.0 |
| fecr protein | SAMN05421747_12243 | Not Available | Negative | 4184736 - 4185938 | 45446.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_12244 | Not Available | Negative | 4185991 - 4186572 | 22758.5 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05421747_12245 | Not Available | Negative | 4186725 - 4187747 | 37865.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
