Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421747_101338 | Not Available | Positive | 451451 - 452590 | 42020.3 |
| acetyl esterase/lipase | SAMN05421747_101339 | Not Available | Positive | 452636 - 455542 | 108542.0 |
| serine aminopeptidase, s33 | SAMN05421747_101340 | Not Available | Positive | 455688 - 458051 | 89584.5 |
| protein of unknown function | SAMN05421747_101341 | Not Available | Positive | 458048 - 459538 | 55515.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421747_101342 | Not Available | Positive | 459753 - 461105 | 50019.2 |
| glucose/galactose transporter | SAMN05421747_101343 | Not Available | Positive | 461124 - 462440 | 48016.1 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN05421747_101344 | Not Available | Positive | 462467 - 463675 | 43777.5 |
| glucosamine-6-phosphate deaminase | SAMN05421747_101345 | Not Available | Positive | 463672 - 464436 | 28011.5 |
| predicted arabinose efflux permease, mfs family | SAMN05421747_101346 | Not Available | Positive | 464520 - 466019 | 54794.4 |
| hypothetical protein | SAMN05421747_101347 | Not Available | Positive | 466044 - 466268 | 8085.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
