Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_12072 | Not Available | Positive | 4062229 - 4062411 | 6712.23 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05421747_12073 | Not Available | Negative | 4062461 - 4063906 | 53961.0 |
| mfs transporter, fhs family, l-fucose permease | SAMN05421747_12075 | Not Available | Negative | 4064342 - 4065601 | 45711.6 |
| hypothetical protein | SAMN05421747_12076 | Not Available | Negative | 4065693 - 4066904 | 44076.2 |
| predicted dehydrogenase | SAMN05421747_12077 | Not Available | Negative | 4066914 - 4067972 | 39157.8 |
| arginyl-trna synthetase | SAMN05421747_12078 | Not Available | Negative | 4067972 - 4069756 | 66954.0 |
| arginine decarboxylase | SAMN05421747_12079 | Not Available | Positive | 4069831 - 4071222 | 54138.6 |
| hypothetical protein | SAMN05421747_12080 | Not Available | Negative | 4071494 - 4071837 | 13359.4 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421747_1211 | Not Available | Negative | 4072106 - 4073410 | 47642.5 |
| glpgli family protein | SAMN05421747_1212 | Not Available | Negative | 4073463 - 4074245 | 29748.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
