Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_12051 | Not Available | Positive | 4040605 - 4041069 | 17136.4 |
| protein sco1/2 | SAMN05421747_12052 | Not Available | Positive | 4041075 - 4041716 | 24217.8 |
| nitrite reductase (no-forming) | SAMN05421747_12053 | Not Available | Positive | 4041713 - 4042138 | 15270.4 |
| hypothetical protein | SAMN05421747_12054 | Not Available | Negative | 4042025 - 4042291 | 9565.62 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421747_12055 | Not Available | Positive | 4042359 - 4043102 | 26414.9 |
| acyl-protein synthetase, luxe | SAMN05421747_12056 | Not Available | Positive | 4043147 - 4044139 | 37300.8 |
| protein of unknown function | SAMN05421747_12057 | Not Available | Negative | 4044190 - 4044528 | 13132.3 |
| hypothetical protein | SAMN05421747_12058 | Not Available | Positive | 4044786 - 4045658 | 31844.5 |
| histidine kinase | SAMN05421747_12059 | Not Available | Positive | 4045703 - 4046746 | 40433.3 |
| two-component system, lytt family, response regulator | SAMN05421747_12060 | Not Available | Positive | 4046743 - 4047486 | 28187.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
