Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starvation-inducible dna-binding protein | SAMN05421747_12041 | Not Available | Negative | 4032624 - 4033103 | 18432.1 |
| membrane-bound serine protease (clpp class) | SAMN05421747_12042 | Not Available | Negative | 4033171 - 4034469 | 46470.1 |
| protein of unknown function | SAMN05421747_12043 | Not Available | Positive | 4034554 - 4035309 | 28498.5 |
| lysm repeat-containing protein | SAMN05421747_12044 | Not Available | Positive | 4035328 - 4036221 | 32069.6 |
| uridine kinase | SAMN05421747_12045 | Not Available | Positive | 4036208 - 4036855 | 25074.9 |
| 3-oxoacid coa-transferase subunit b | SAMN05421747_12046 | Not Available | Negative | 4036850 - 4037509 | 23692.3 |
| 3-oxoacid coa-transferase subunit a | SAMN05421747_12047 | Not Available | Negative | 4037533 - 4038234 | 25221.7 |
| hypothetical protein | SAMN05421747_12048 | Not Available | Positive | 4038372 - 4038563 | 7456.06 |
| major facilitator superfamily protein | SAMN05421747_12049 | Not Available | Negative | 4038565 - 4039803 | 45044.9 |
| putative dna-binding domain-containing protein | SAMN05421747_12050 | Not Available | Positive | 4039954 - 4040583 | 23649.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
