Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent lon protease | SAMN05421747_12031 | Not Available | Positive | 4020147 - 4022603 | 91778.4 |
| putative hemolysin | SAMN05421747_12032 | Not Available | Positive | 4022661 - 4023956 | 47716.0 |
| chromate reductase | SAMN05421747_12033 | Not Available | Positive | 4023995 - 4024546 | 20268.0 |
| orotidine-5'-phosphate decarboxylase | SAMN05421747_12034 | Not Available | Negative | 4024539 - 4025372 | 30520.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421747_12035 | Not Available | Negative | 4025435 - 4026037 | 22224.2 |
| tigr02757 family protein | SAMN05421747_12036 | Not Available | Negative | 4026041 - 4026916 | 34006.8 |
| cystathionine gamma-lyase/cystathionine beta-lyase | SAMN05421747_12037 | Not Available | Negative | 4026913 - 4028052 | 41492.7 |
| prolyl-trna synthetase | SAMN05421747_12038 | Not Available | Negative | 4028098 - 4029570 | 55758.5 |
| hypothetical protein | SAMN05421747_12039 | Not Available | Positive | 4029573 - 4030853 | 46779.5 |
| hypothetical protein | SAMN05421747_12040 | Not Available | Positive | 4030941 - 4032527 | 58318.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
