Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoin utilization deacetylase acuc | SAMN05421747_12011 | Not Available | Negative | 4003498 - 4004400 | 33669.6 |
| hypothetical protein | SAMN05421747_12012 | Not Available | Positive | 4004536 - 4005183 | 23816.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421747_12013 | Not Available | Positive | 4005270 - 4005740 | 17069.4 |
| 4fe-4s dicluster domain-containing protein | SAMN05421747_12014 | Not Available | Negative | 4005829 - 4006179 | 12657.5 |
| acyl-coa reductase (luxc) | SAMN05421747_12015 | Not Available | Positive | 4006308 - 4007354 | 38723.1 |
| hypothetical protein | SAMN05421747_12016 | Not Available | Positive | 4007397 - 4007600 | 7614.53 |
| cell division transport system atp-binding protein | SAMN05421747_12017 | Not Available | Positive | 4007604 - 4008284 | 25178.9 |
| molecular chaperone grpe | SAMN05421747_12018 | Not Available | Positive | 4008445 - 4008987 | 19971.8 |
| molecular chaperone dnaj | SAMN05421747_12019 | Not Available | Positive | 4009003 - 4010151 | 41480.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421747_12020 | Not Available | Positive | 4010484 - 4011074 | 20862.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
