Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_1201 | Not Available | Negative | 3996566 - 3996778 | 8219.0 |
| hypothetical protein | SAMN05421747_1202 | Not Available | Negative | 3996780 - 3996956 | 6977.41 |
| hypothetical protein | SAMN05421747_1203 | Not Available | Negative | 3996961 - 3997326 | 14341.2 |
| antirestriction protein | SAMN05421747_1204 | Not Available | Negative | 3997601 - 3998233 | 24490.7 |
| hypothetical protein | SAMN05421747_1205 | Not Available | Positive | 3998627 - 3998788 | 6081.55 |
| site-specific dna recombinase | SAMN05421747_1206 | Not Available | Positive | 3998815 - 3999933 | 43294.8 |
| Trna-lys | Not Available | Not Available | Positive | 4000342 - 4000414 | Not Available |
| hypothetical protein | SAMN05421747_1208 | Not Available | Negative | 4000592 - 4001023 | 16197.5 |
| predicted dehydrogenase | SAMN05421747_1209 | Not Available | Positive | 4001287 - 4002411 | 41030.5 |
| hypothetical protein | SAMN05421747_12010 | Not Available | Negative | 4002427 - 4003482 | 40806.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
