Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_101328 | Not Available | Positive | 435683 - 438064 | 88870.0 |
| mn2+ and fe2+ transporters of the nramp family | SAMN05421747_101329 | Not Available | Positive | 438071 - 439288 | 42964.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421747_101330 | Not Available | Positive | 439293 - 440306 | 37374.1 |
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | SAMN05421747_101331 | Not Available | Positive | 440313 - 441374 | 39307.3 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421747_101332 | Not Available | Positive | 441572 - 442582 | 36016.6 |
| predicted dehydrogenase | SAMN05421747_101333 | Not Available | Positive | 442632 - 443777 | 42425.8 |
| dienelactone hydrolase family protein | SAMN05421747_101334 | Not Available | Positive | 443795 - 444967 | 44548.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_101335 | Not Available | Positive | 445066 - 448269 | 119653.0 |
| starch-binding associating with outer membrane | SAMN05421747_101336 | Not Available | Positive | 448280 - 450178 | 72866.1 |
| protein of unknown function | SAMN05421747_101337 | Not Available | Positive | 450190 - 451377 | 45301.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
