Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_11930 | Not Available | Positive | 3954810 - 3955316 | 19132.5 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421747_11931 | Not Available | Positive | 3955590 - 3956612 | 38590.4 |
| tonb-dependent receptor | SAMN05421747_11932 | Not Available | Positive | 3956914 - 3960330 | 127916.0 |
| hypothetical protein | SAMN05421747_11933 | Not Available | Positive | 3960333 - 3962051 | 63957.3 |
| hypothetical protein | SAMN05421747_11934 | Not Available | Positive | 3962053 - 3963330 | 48155.0 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05421747_11935 | Not Available | Positive | 3963353 - 3964456 | 42093.6 |
| fasciclin domain-containing protein | SAMN05421747_11936 | Not Available | Positive | 3964469 - 3965908 | 54913.5 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05421747_11937 | Not Available | Positive | 3965910 - 3966917 | 37383.6 |
| ipt/tig domain-containing protein | SAMN05421747_11938 | Not Available | Positive | 3966914 - 3969172 | 80348.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11939 | Not Available | Positive | 3969238 - 3972594 | 124497.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
