Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN05421747_11871 | Not Available | Positive | 3917199 - 3918164 | 34124.5 |
| putative hemolysin | SAMN05421747_1191 | Not Available | Positive | 3918449 - 3920203 | 66600.8 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421747_1192 | Not Available | Positive | 3920241 - 3920888 | 25347.8 |
| protein of unknown function | SAMN05421747_1193 | Not Available | Positive | 3921020 - 3922183 | 42955.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_1194 | Not Available | Positive | 3922284 - 3925742 | 127789.0 |
| starch-binding associating with outer membrane | SAMN05421747_1195 | Not Available | Positive | 3925775 - 3927433 | 62532.8 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05421747_1196 | Not Available | Positive | 3927459 - 3928319 | 30961.9 |
| nhl repeat-containing protein | SAMN05421747_1197 | Not Available | Positive | 3928365 - 3929702 | 47812.0 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05421747_1198 | Not Available | Positive | 3929772 - 3930560 | 28798.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_1199 | Not Available | Positive | 3930642 - 3931274 | 24898.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
