Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide pyruvyl transferase family protein wcak | SAMN05421747_11851 | Not Available | Negative | 3895013 - 3896221 | 44956.7 |
| osmotically inducible protein osmc | SAMN05421747_11852 | Not Available | Positive | 3896329 - 3896745 | 14891.6 |
| Trna-thr | Not Available | Not Available | Positive | 3896836 - 3896908 | Not Available |
| hypothetical protein | SAMN05421747_11854 | Not Available | Negative | 3896908 - 3897471 | 20960.5 |
| hypothetical protein | SAMN05421747_11855 | Not Available | Negative | 3897474 - 3898133 | 24897.3 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN05421747_11856 | Not Available | Positive | 3898450 - 3899388 | 35571.6 |
| chloride channel protein, cic family | SAMN05421747_11857 | Not Available | Positive | 3899398 - 3901191 | 65945.6 |
| protein of unknown function | SAMN05421747_11858 | Not Available | Negative | 3901199 - 3901942 | 27364.7 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05421747_11859 | Not Available | Positive | 3902249 - 3904585 | 88092.2 |
| protein of unknown function | SAMN05421747_11860 | Not Available | Positive | 3904589 - 3905368 | 28669.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
