Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luciferase family oxidoreductase, group 1 | SAMN05421747_11841 | Not Available | Negative | 3881080 - 3882072 | 35992.2 |
| conserved hypothetical protein 95 | SAMN05421747_11842 | Not Available | Negative | 3882116 - 3883306 | 44516.7 |
| cysteine desulfurase | SAMN05421747_11843 | Not Available | Negative | 3883303 - 3884490 | 42122.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_11844 | Not Available | Positive | 3884652 - 3885200 | 21444.8 |
| protein of unknown function | SAMN05421747_11845 | Not Available | Positive | 3885234 - 3886376 | 42270.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11846 | Not Available | Positive | 3886476 - 3889748 | 119728.0 |
| starch-binding associating with outer membrane | SAMN05421747_11847 | Not Available | Positive | 3889755 - 3891239 | 55359.6 |
| fad dependent oxidoreductase | SAMN05421747_11848 | Not Available | Positive | 3891239 - 3892603 | 49192.4 |
| hypothetical protein | SAMN05421747_11849 | Not Available | Positive | 3892623 - 3893819 | 43408.1 |
| coenzyme f420 hydrogenase subunit beta | SAMN05421747_11850 | Not Available | Negative | 3893791 - 3895005 | 45029.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
