Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| basic amino acid/polyamine antiporter, apa family | SAMN05421747_11831 | Not Available | Positive | 3871907 - 3873400 | 53449.5 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421747_11832 | Not Available | Positive | 3873400 - 3874986 | 59355.9 |
| abc-2 type transport system atp-binding protein | SAMN05421747_11833 | Not Available | Negative | 3874998 - 3875675 | 25163.7 |
| hypothetical protein | SAMN05421747_11834 | Not Available | Negative | 3875672 - 3876595 | 34476.2 |
| ph domain-containing protein | SAMN05421747_11835 | Not Available | Positive | 3876695 - 3877141 | 16578.6 |
| hypothetical protein | SAMN05421747_11836 | Not Available | Negative | 3877033 - 3877263 | 8498.32 |
| Trna-gly | Not Available | Not Available | Positive | 3877284 - 3877359 | Not Available |
| regulatory protein | SAMN05421747_11838 | Not Available | Negative | 3877424 - 3877912 | 18970.8 |
| alanine racemase | SAMN05421747_11839 | Not Available | Positive | 3877970 - 3880432 | 89413.0 |
| uncharacterized membrane protein | SAMN05421747_11840 | Not Available | Positive | 3880464 - 3881060 | 21827.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
