Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cubico group peptidase, beta-lactamase class c family | SAMN05421747_11821 | Not Available | Positive | 3856699 - 3857883 | 44039.8 |
| membrane dipeptidase | SAMN05421747_11822 | Not Available | Positive | 3857902 - 3859089 | 43122.6 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421747_11823 | Not Available | Positive | 3859091 - 3860719 | 60276.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421747_11824 | Not Available | Positive | 3860915 - 3862549 | 60938.0 |
| hypothetical protein | SAMN05421747_11825 | Not Available | Positive | 3862561 - 3863115 | 19931.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11826 | Not Available | Positive | 3863160 - 3866219 | 113198.0 |
| susd family protein | SAMN05421747_11827 | Not Available | Positive | 3866256 - 3867686 | 52795.3 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421747_11828 | Not Available | Positive | 3867745 - 3868950 | 43976.4 |
| ornithine cyclodeaminase | SAMN05421747_11829 | Not Available | Positive | 3869018 - 3869959 | 34343.6 |
| zn-dependent dipeptidase, dipeptidase homolog | SAMN05421747_11830 | Not Available | Positive | 3870030 - 3871910 | 69847.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
