Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase | SAMN05421747_101318 | Not Available | Positive | 421344 - 422129 | 28767.3 |
| phosphoribosyl-atp pyrophosphohydrolase / phosphoribosyl-amp cyclohydrolase | SAMN05421747_101319 | Not Available | Positive | 422135 - 422719 | 22049.3 |
| wd domain-containing protein, g-beta repeat-containing protein | SAMN05421747_101320 | Not Available | Positive | 422725 - 423645 | 34248.0 |
| gaf domain-containing protein | SAMN05421747_101321 | Not Available | Negative | 423632 - 424108 | 17298.0 |
| hexosaminidase | SAMN05421747_101322 | Not Available | Negative | 424111 - 425994 | 70849.3 |
| laci family transcriptional regulator | SAMN05421747_101323 | Not Available | Positive | 426241 - 427305 | 40220.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_101324 | Not Available | Positive | 427665 - 430751 | 115109.0 |
| starch-binding associating with outer membrane | SAMN05421747_101325 | Not Available | Positive | 430756 - 432252 | 56083.6 |
| fasciclin domain-containing protein | SAMN05421747_101326 | Not Available | Positive | 432308 - 433030 | 27214.2 |
| arylsulfatase a | SAMN05421747_101327 | Not Available | Positive | 432987 - 435686 | 101806.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
