Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane insertion c-terminal signal | SAMN05421747_1181 | Not Available | Positive | 3825640 - 3825736 | 3629.22 |
| dihydroxy-acid dehydratase | SAMN05421747_1182 | Not Available | Negative | 3825864 - 3827552 | 59671.1 |
| predicted dehydrogenase | SAMN05421747_1183 | Not Available | Negative | 3827591 - 3828664 | 40150.4 |
| l-fuconolactonase | SAMN05421747_1184 | Not Available | Negative | 3828669 - 3829535 | 33094.4 |
| arac-type dna-binding protein | SAMN05421747_1185 | Not Available | Positive | 3829704 - 3830618 | 35190.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_1186 | Not Available | Positive | 3830754 - 3833975 | 118934.0 |
| starch-binding associating with outer membrane | SAMN05421747_1187 | Not Available | Positive | 3833989 - 3835809 | 69492.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_1188 | Not Available | Positive | 3835796 - 3838969 | 117887.0 |
| starch-binding associating with outer membrane | SAMN05421747_1189 | Not Available | Positive | 3838983 - 3840773 | 67577.0 |
| alpha-l-rhamnosidase | SAMN05421747_11810 | Not Available | Positive | 3840796 - 3843498 | 100752.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
