Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator | SAMN05421747_11776 | Not Available | Positive | 3808643 - 3808819 | 6385.91 |
| hypothetical protein | SAMN05421747_11777 | Not Available | Positive | 3808933 - 3810090 | 44572.4 |
| protein of unknown function | SAMN05421747_11778 | Not Available | Negative | 3810169 - 3810711 | 20948.0 |
| pas domain s-box-containing protein | SAMN05421747_11779 | Not Available | Positive | 3810847 - 3811887 | 39488.7 |
| pas domain s-box-containing protein | SAMN05421747_11780 | Not Available | Positive | 3811896 - 3812732 | 31004.3 |
| zn-dependent peptidase imma, m78 family | SAMN05421747_11781 | Not Available | Positive | 3813123 - 3814217 | 42113.3 |
| hypothetical protein | SAMN05421747_11782 | Not Available | Positive | 3814226 - 3814381 | 5902.16 |
| hypothetical protein | SAMN05421747_11783 | Not Available | Positive | 3814385 - 3814690 | 11629.3 |
| hypothetical protein | SAMN05421747_11784 | Not Available | Positive | 3814645 - 3814884 | 9534.7 |
| hypothetical protein | SAMN05421747_11785 | Not Available | Positive | 3815360 - 3815566 | 7588.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
