Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11766 | Not Available | Positive | 3794801 - 3797851 | 113698.0 |
| ricin-type beta-trefoil lectin domain-like | SAMN05421747_11767 | Not Available | Positive | 3797892 - 3799784 | 70073.9 |
| alpha-mannosidase | SAMN05421747_11768 | Not Available | Positive | 3799911 - 3802502 | 97851.2 |
| phosphatidylglycerol:prolipoprotein diacylglycerol transferase | SAMN05421747_11769 | Not Available | Positive | 3802511 - 3803650 | 43136.2 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421747_11770 | Not Available | Negative | 3803762 - 3804253 | 18907.1 |
| hypothetical protein | SAMN05421747_11771 | Not Available | Negative | 3804379 - 3804573 | 7171.69 |
| protein of unknown function (du1801) | SAMN05421747_11772 | Not Available | Negative | 3804679 - 3805125 | 17022.3 |
| uncharacterized membrane protein ykgb | SAMN05421747_11773 | Not Available | Negative | 3805363 - 3805929 | 20521.4 |
| arac-type dna-binding protein | SAMN05421747_11774 | Not Available | Negative | 3806000 - 3806830 | 31416.6 |
| butirosin biosynthesis protein h, n-terminal | SAMN05421747_11775 | Not Available | Negative | 3807182 - 3808195 | 38338.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
