Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_11746 | Not Available | Negative | 3769508 - 3769720 | 8436.67 |
| predicted atpase | SAMN05421747_11747 | Not Available | Positive | 3769878 - 3770432 | 21285.0 |
| integral membrane protein | SAMN05421747_11748 | Not Available | Negative | 3770499 - 3770834 | 12827.9 |
| hypothetical protein | SAMN05421747_11749 | Not Available | Negative | 3770837 - 3771361 | 20372.4 |
| dna-binding transcriptional regulator, acrr family | SAMN05421747_11750 | Not Available | Negative | 3771391 - 3772044 | 25044.4 |
| hypothetical protein | SAMN05421747_11751 | Not Available | Negative | 3772041 - 3772160 | 4301.06 |
| 3-methyladenine dna glycosylase alkd | SAMN05421747_11752 | Not Available | Negative | 3772171 - 3772812 | 24745.1 |
| tetratricopeptide repeat-containing protein | SAMN05421747_11753 | Not Available | Positive | 3773507 - 3776233 | 103748.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421747_11754 | Not Available | Positive | 3776384 - 3777265 | 31744.5 |
| arac-type dna-binding protein | SAMN05421747_11755 | Not Available | Positive | 3777286 - 3778101 | 31503.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
