Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose mutarotase | SAMN05421747_11716 | Not Available | Positive | 3741238 - 3742104 | 32865.7 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05421747_11717 | Not Available | Positive | 3742101 - 3742655 | 20740.7 |
| two-component system, ompr family, response regulator rpaa | SAMN05421747_11718 | Not Available | Negative | 3742701 - 3743072 | 14082.8 |
| hypothetical protein | SAMN05421747_11719 | Not Available | Positive | 3743125 - 3743226 | 3989.16 |
| hypothetical protein | SAMN05421747_11720 | Not Available | Positive | 3743226 - 3744017 | 28955.6 |
| hypothetical protein | SAMN05421747_11721 | Not Available | Positive | 3744023 - 3744616 | 21701.7 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN05421747_11722 | Not Available | Negative | 3744657 - 3745265 | 22742.1 |
| dna-binding transcriptional regulator ybjk | SAMN05421747_11723 | Not Available | Positive | 3745376 - 3745948 | 21455.0 |
| dna-binding transcriptional regulator, marr family | SAMN05421747_11724 | Not Available | Positive | 3746132 - 3746587 | 17007.6 |
| rifampin adp-ribosylating transferase | SAMN05421747_11725 | Not Available | Positive | 3746577 - 3747026 | 16288.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
