Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_101308 | Not Available | Negative | 412871 - 413449 | 22075.7 |
| hypothetical protein | SAMN05421747_101309 | Not Available | Negative | 413455 - 414234 | 29129.0 |
| phosphate starvation-inducible protein phoh | SAMN05421747_101310 | Not Available | Positive | 414430 - 415392 | 35371.3 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN05421747_101311 | Not Available | Positive | 415442 - 416392 | 36480.3 |
| anti-anti-sigma factor | SAMN05421747_101312 | Not Available | Positive | 416425 - 416808 | 13879.8 |
| ribonuclease z | SAMN05421747_101313 | Not Available | Positive | 416805 - 417716 | 34422.4 |
| histidinol-phosphate aminotransferase | SAMN05421747_101314 | Not Available | Positive | 417731 - 418795 | 40039.8 |
| imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase | SAMN05421747_101315 | Not Available | Positive | 418873 - 420012 | 43030.0 |
| glutamine amidotransferase | SAMN05421747_101316 | Not Available | Positive | 420009 - 420602 | 21844.2 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | SAMN05421747_101317 | Not Available | Positive | 420625 - 421374 | 28052.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
