Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_116105 | Not Available | Positive | 3698627 - 3699523 | 32718.1 |
| aaa domain-containing protein | SAMN05421747_116106 | Not Available | Negative | 3699520 - 3699852 | 13303.7 |
| hypothetical protein | SAMN05421747_116107 | Not Available | Positive | 3699859 - 3700002 | 5524.55 |
| Trna-ser | Not Available | Not Available | Positive | 3700687 - 3700774 | Not Available |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421747_116109 | Not Available | Negative | 3700835 - 3702130 | 48149.1 |
| tonb family c-terminal domain-containing protein | SAMN05421747_116110 | Not Available | Negative | 3702212 - 3703468 | 45508.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_116111 | Not Available | Negative | 3703476 - 3704057 | 22361.8 |
| ca-activated chloride channel family protein | SAMN05421747_116112 | Not Available | Positive | 3704178 - 3706076 | 68357.1 |
| cd2+/zn2+-exporting atpase | SAMN05421747_116113 | Not Available | Negative | 3706087 - 3708063 | 70881.4 |
| upf0271 protein | SAMN05421747_116114 | Not Available | Negative | 3708107 - 3708844 | 26356.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
