Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421747_11665 | Not Available | Negative | 3661501 - 3662382 | 31385.5 |
| hypothetical protein | SAMN05421747_11666 | Not Available | Negative | 3662384 - 3662920 | 20141.7 |
| dna ligase (nad+) | SAMN05421747_11667 | Not Available | Negative | 3662926 - 3664959 | 76507.4 |
| hypothetical protein | SAMN05421747_11668 | Not Available | Negative | 3664978 - 3665712 | 27178.9 |
| hypothetical protein | SAMN05421747_11669 | Not Available | Negative | 3665790 - 3666821 | 39512.2 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05421747_11670 | Not Available | Negative | 3666818 - 3667684 | 33953.6 |
| wbqc-like protein family protein | SAMN05421747_11671 | Not Available | Positive | 3667703 - 3668380 | 26575.9 |
| hypothetical protein | SAMN05421747_11672 | Not Available | Positive | 3668442 - 3669101 | 24467.5 |
| hypothetical protein | SAMN05421747_11673 | Not Available | Negative | 3669090 - 3669731 | 23195.4 |
| phosphopantetheine adenylyltransferase | SAMN05421747_11674 | Not Available | Positive | 3669872 - 3670354 | 17568.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
