Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trka domain protein | SAMN05421747_101298 | Not Available | Negative | 401538 - 402014 | 17455.0 |
| polyisoprenoid-binding protein ycei | SAMN05421747_101299 | Not Available | Positive | 402212 - 402814 | 21424.5 |
| mfs transporter, fhs family, l-fucose permease | SAMN05421747_101300 | Not Available | Positive | 402923 - 404335 | 50209.8 |
| fad/fmn-containing dehydrogenase | SAMN05421747_101301 | Not Available | Positive | 404402 - 407353 | 109187.0 |
| glutamate dehydrogenase (nad(p)+) | SAMN05421747_101302 | Not Available | Negative | 407389 - 408825 | 52296.8 |
| hypothetical protein | SAMN05421747_101303 | Not Available | Negative | 408902 - 409120 | 7903.14 |
| heme exporter protein c | SAMN05421747_101304 | Not Available | Negative | 409189 - 409857 | 25027.1 |
| heme exporter protein b | SAMN05421747_101305 | Not Available | Negative | 409871 - 410530 | 24456.8 |
| hypothetical protein | SAMN05421747_101306 | Not Available | Negative | 410567 - 410911 | 12294.8 |
| abc transporter, permease/atp-binding protein | SAMN05421747_101307 | Not Available | Negative | 410989 - 412815 | 67426.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
