Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | SAMN05421747_11625 | Not Available | Negative | 3608538 - 3609743 | 44186.7 |
| cation diffusion facilitator family transporter | SAMN05421747_11626 | Not Available | Positive | 3609826 - 3610809 | 36762.1 |
| penicillin-binding protein 1a | SAMN05421747_11627 | Not Available | Positive | 3610999 - 3613380 | 90188.0 |
| wd40-like beta propeller repeat | SAMN05421747_11628 | Not Available | Positive | 3613514 - 3616579 | 115796.0 |
| putative endonuclease | SAMN05421747_11629 | Not Available | Negative | 3616685 - 3617029 | 13518.3 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN05421747_11630 | Not Available | Positive | 3617138 - 3617914 | 29055.8 |
| hypothetical protein | SAMN05421747_11631 | Not Available | Negative | 3617978 - 3618145 | 6276.49 |
| ribosome maturation factor rimp | SAMN05421747_11632 | Not Available | Positive | 3618165 - 3618635 | 17376.9 |
| n utilization substance protein a | SAMN05421747_11633 | Not Available | Positive | 3618637 - 3619875 | 47179.9 |
| translation initiation factor if-2 | SAMN05421747_11634 | Not Available | Positive | 3619989 - 3622880 | 104972.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
