Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | SAMN05421747_11615 | Not Available | Positive | 3600394 - 3601665 | 45513.7 |
| hypothetical protein | SAMN05421747_11616 | Not Available | Positive | 3601667 - 3602335 | 25545.8 |
| protein of unknown function | SAMN05421747_11617 | Not Available | Positive | 3602371 - 3602991 | 23149.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421747_11618 | Not Available | Positive | 3603004 - 3603954 | 35700.4 |
| hypothetical protein | SAMN05421747_11619 | Not Available | Positive | 3604101 - 3604319 | 8240.33 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN05421747_11620 | Not Available | Positive | 3604316 - 3605089 | 28755.7 |
| hypothetical protein | SAMN05421747_11621 | Not Available | Positive | 3605165 - 3605317 | 5395.07 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN05421747_11622 | Not Available | Negative | 3605298 - 3606008 | 25674.8 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05421747_11623 | Not Available | Negative | 3606026 - 3607075 | 40136.4 |
| putative abc transport system permease protein | SAMN05421747_11624 | Not Available | Positive | 3607251 - 3608498 | 45357.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
