Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_115118 | Not Available | Positive | 3581546 - 3584623 | 113825.0 |
| starch-binding associating with outer membrane | SAMN05421747_115119 | Not Available | Positive | 3584640 - 3586220 | 59400.2 |
| protein of unknown function | SAMN05421747_115120 | Not Available | Positive | 3586234 - 3587058 | 30936.9 |
| predicted protein | SAMN05421747_115121 | Not Available | Positive | 3587122 - 3588111 | 36292.2 |
| hypothetical protein | SAMN05421747_115122 | Not Available | Positive | 3588745 - 3589035 | 10770.0 |
| is66 orf2 like protein | SAMN05421747_115123 | Not Available | Positive | 3589035 - 3589326 | 10892.2 |
| hypothetical protein | SAMN05421747_1161 | Not Available | Positive | 3589328 - 3589405 | 3019.71 |
| hypothetical protein | SAMN05421747_1162 | Not Available | Negative | 3589407 - 3590087 | 24198.7 |
| release factor glutamine methyltransferase | SAMN05421747_1163 | Not Available | Negative | 3590098 - 3590991 | 33846.7 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase | SAMN05421747_1164 | Not Available | Positive | 3591091 - 3592152 | 39784.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
