Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acylglucosamine 2-epimerase | SAMN05421747_11578 | Not Available | Positive | 3525935 - 3527134 | 46597.8 |
| mfs transporter, fhs family, l-fucose permease | SAMN05421747_11579 | Not Available | Positive | 3527136 - 3528380 | 43962.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11580 | Not Available | Positive | 3528469 - 3531684 | 119962.0 |
| starch-binding associating with outer membrane | SAMN05421747_11581 | Not Available | Positive | 3531696 - 3533594 | 72397.5 |
| protein of unknown function | SAMN05421747_11582 | Not Available | Positive | 3533627 - 3534817 | 44676.2 |
| protein of unknown function | SAMN05421747_11583 | Not Available | Positive | 3534852 - 3536084 | 46612.0 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421747_11584 | Not Available | Positive | 3536140 - 3537243 | 41458.3 |
| hypothetical protein | SAMN05421747_11585 | Not Available | Positive | 3537240 - 3538706 | 55029.6 |
| fad dependent oxidoreductase | SAMN05421747_11586 | Not Available | Positive | 3538718 - 3540418 | 63641.7 |
| adp-ribosylglycohydrolase | SAMN05421747_11587 | Not Available | Positive | 3540516 - 3542069 | 58791.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
