Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type antimicrobial peptide transport system, permease component | SAMN05421747_11568 | Not Available | Negative | 3514530 - 3516092 | 57497.6 |
| macb-like core domain-containing protein | SAMN05421747_11569 | Not Available | Negative | 3516110 - 3516991 | 32984.1 |
| putative abc transport system permease protein | SAMN05421747_11570 | Not Available | Negative | 3517059 - 3519464 | 88834.2 |
| hypothetical protein | SAMN05421747_11571 | Not Available | Negative | 3519542 - 3519763 | 8806.49 |
| 2-dehydropantoate 2-reductase | SAMN05421747_11572 | Not Available | Positive | 3519847 - 3520716 | 32032.7 |
| putative abc transport system atp-binding protein | SAMN05421747_11573 | Not Available | Negative | 3520742 - 3521416 | 25309.6 |
| hypothetical protein | SAMN05421747_11574 | Not Available | Negative | 3521719 - 3522306 | 21792.7 |
| starch phosphorylase | SAMN05421747_11575 | Not Available | Positive | 3522754 - 3523479 | 26854.8 |
| starch phosphorylase | SAMN05421747_11576 | Not Available | Positive | 3523507 - 3524280 | 29781.2 |
| rok family protein (putative glucokinase) | SAMN05421747_11577 | Not Available | Negative | 3524340 - 3525578 | 44892.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
