Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_11558 | Not Available | Positive | 3502017 - 3502673 | 26325.1 |
| pare toxin of type ii toxin-antitoxin system, parde | SAMN05421747_11559 | Not Available | Negative | 3502675 - 3502974 | 11844.3 |
| putative addiction module component, tigr02574 family | SAMN05421747_11560 | Not Available | Negative | 3502974 - 3503210 | 9175.89 |
| helicase conserved c-terminal domain-containing protein | SAMN05421747_11561 | Not Available | Positive | 3503329 - 3506817 | 132033.0 |
| hypothetical protein | SAMN05421747_11562 | Not Available | Positive | 3506906 - 3508090 | 44386.4 |
| hypothetical protein | SAMN05421747_11563 | Not Available | Negative | 3508233 - 3509993 | 66720.9 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05421747_11564 | Not Available | Positive | 3510124 - 3510618 | 18240.9 |
| hypothetical protein | SAMN05421747_11565 | Not Available | Negative | 3511161 - 3512516 | 49398.1 |
| hypothetical protein | SAMN05421747_11566 | Not Available | Negative | 3512686 - 3513339 | 23904.3 |
| putative abc transport system permease protein | SAMN05421747_11567 | Not Available | Negative | 3513808 - 3514416 | 22658.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
