Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_10118 | Not Available | Positive | 19583 - 19813 | 8692.59 |
| pp_00018 | SAMN05421747_10119 | Not Available | Negative | 19781 - 20362 | Not Available |
| hypothetical protein | SAMN05421747_10120 | Not Available | Negative | 20475 - 21029 | 20969.0 |
| atp-dependent dna helicase recg | SAMN05421747_10121 | Not Available | Negative | 21200 - 23260 | 77951.3 |
| chloramphenicol-sensitive protein rard | SAMN05421747_10122 | Not Available | Negative | 23326 - 24225 | 34057.9 |
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN05421747_10123 | Not Available | Negative | 24226 - 24612 | 13529.1 |
| hypothetical protein | SAMN05421747_10124 | Not Available | Negative | 24643 - 24786 | 5684.16 |
| cupin-like domain-containing protein | SAMN05421747_10125 | Not Available | Negative | 24859 - 25725 | 33897.8 |
| gliding motility associated protien gldn | SAMN05421747_10126 | Not Available | Negative | 25887 - 26849 | 36175.6 |
| gliding motility-associated protein gldm | SAMN05421747_10127 | Not Available | Negative | 26868 - 28388 | 54202.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
