Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_11548 | Not Available | Positive | 3493373 - 3493975 | 21709.2 |
| d-alanyl-d-alanine carboxypeptidase | SAMN05421747_11549 | Not Available | Positive | 3493975 - 3495129 | 42009.7 |
| phosphate/phosphite/phosphonate abc transporter binding protein | SAMN05421747_11550 | Not Available | Positive | 3495164 - 3496033 | 30924.9 |
| hypothetical protein | SAMN05421747_11551 | Not Available | Positive | 3496600 - 3497379 | 29048.8 |
| hypothetical protein | SAMN05421747_11552 | Not Available | Negative | 3497390 - 3497677 | 10787.1 |
| cro/c1-type hth dna-binding domain-containing protein | SAMN05421747_11553 | Not Available | Negative | 3498069 - 3498293 | 8255.32 |
| hepn domain-containing protein | SAMN05421747_11554 | Not Available | Positive | 3498403 - 3500154 | 65977.6 |
| hypothetical protein | SAMN05421747_11555 | Not Available | Positive | 3500151 - 3500858 | 27650.1 |
| hypothetical protein | SAMN05421747_11556 | Not Available | Positive | 3500858 - 3501634 | 30527.7 |
| hypothetical protein | SAMN05421747_11557 | Not Available | Positive | 3501618 - 3501998 | 14694.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
