Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_11538 | Not Available | Negative | 3482886 - 3483653 | 28497.8 |
| two-component system, lytt family, response regulator | SAMN05421747_11539 | Not Available | Negative | 3483836 - 3484564 | 27851.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421747_11540 | Not Available | Positive | 3484697 - 3485293 | 22722.0 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421747_11541 | Not Available | Negative | 3485296 - 3485925 | 23268.5 |
| tetratricopeptide repeat-containing protein | SAMN05421747_11542 | Not Available | Negative | 3486006 - 3487940 | 72405.3 |
| two-component system, lytt family, response regulator | SAMN05421747_11543 | Not Available | Positive | 3488099 - 3488854 | 28259.3 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05421747_11544 | Not Available | Negative | 3488849 - 3489613 | 28588.7 |
| zu5 domain-containing protein | SAMN05421747_11545 | Not Available | Negative | 3489630 - 3491096 | 53544.6 |
| ompa family protein | SAMN05421747_11546 | Not Available | Positive | 3491182 - 3492510 | 47800.5 |
| hypothetical protein | SAMN05421747_11547 | Not Available | Positive | 3492517 - 3493332 | 30410.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
