Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyladenine dna glycosylase alkd | SAMN05421747_114100 | Not Available | Negative | 3441430 - 3442095 | 24892.9 |
| tonb family c-terminal domain-containing protein | SAMN05421747_114101 | Not Available | Negative | 3442224 - 3443210 | 37223.4 |
| Trna-arg | Not Available | Not Available | Positive | 3443386 - 3443460 | Not Available |
| udpglucose 6-dehydrogenase | SAMN05421747_1151 | Not Available | Negative | 3443792 - 3443982 | 6898.41 |
| dna primase | SAMN05421747_1152 | Not Available | Positive | 3444139 - 3446076 | 72788.9 |
| putative endonuclease | SAMN05421747_1153 | Not Available | Positive | 3446076 - 3446441 | 13850.6 |
| glutamine cyclotransferase | SAMN05421747_1154 | Not Available | Positive | 3446481 - 3447521 | 38982.9 |
| potassium uptake protein, trkh family | SAMN05421747_1155 | Not Available | Positive | 3447531 - 3449309 | 65517.0 |
| trk system potassium uptake protein trka | SAMN05421747_1156 | Not Available | Positive | 3449322 - 3450008 | 24880.3 |
| membrane protein yfho | SAMN05421747_1157 | Not Available | Positive | 3450135 - 3452606 | 92751.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
