Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enterochelin esterase | SAMN05421747_11470 | Not Available | Positive | 3400532 - 3401371 | 30868.1 |
| hypothetical protein | SAMN05421747_11471 | Not Available | Negative | 3401399 - 3403777 | 90119.4 |
| alpha-n-arabinofuranosidase | SAMN05421747_11472 | Not Available | Negative | 3403780 - 3405495 | 63549.1 |
| beta-xylosidase | SAMN05421747_11473 | Not Available | Negative | 3405686 - 3407269 | 58775.9 |
| starch-binding associating with outer membrane | SAMN05421747_11474 | Not Available | Negative | 3407536 - 3409512 | 73051.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11475 | Not Available | Negative | 3409524 - 3412616 | 114169.0 |
| laci family transcriptional regulator | SAMN05421747_11476 | Not Available | Positive | 3412877 - 3413941 | 39595.6 |
| alpha-glucuronidase | SAMN05421747_11477 | Not Available | Positive | 3413922 - 3416087 | 80563.6 |
| glycosyl hydrolase family 67 n-terminus | SAMN05421747_11478 | Not Available | Positive | 3416319 - 3418904 | 98813.6 |
| laci family transcriptional regulator | SAMN05421747_11479 | Not Available | Negative | 3418977 - 3420068 | 40813.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
