Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cubico group peptidase, beta-lactamase class c family | SAMN05421747_11450 | Not Available | Positive | 3361799 - 3363163 | 51781.2 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421747_11451 | Not Available | Positive | 3363168 - 3364304 | 41105.8 |
| protein of unknown function | SAMN05421747_11452 | Not Available | Negative | 3364447 - 3365682 | 45708.2 |
| protein of unknown function | SAMN05421747_11453 | Not Available | Negative | 3365703 - 3366890 | 45050.7 |
| starch-binding associating with outer membrane | SAMN05421747_11454 | Not Available | Negative | 3366966 - 3368834 | 72116.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11455 | Not Available | Negative | 3368846 - 3372358 | 131630.0 |
| fecr protein | SAMN05421747_11456 | Not Available | Negative | 3372520 - 3373755 | 45566.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421747_11457 | Not Available | Negative | 3373846 - 3374397 | 21442.7 |
| sialate o-acetylesterase | SAMN05421747_11458 | Not Available | Negative | 3374542 - 3376488 | 72182.9 |
| glycosyl hydrolases family 43 | SAMN05421747_11459 | Not Available | Negative | 3376491 - 3377528 | 39046.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
