Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN05421747_11430 | Not Available | Positive | 3340044 - 3340808 | 28828.4 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421747_11431 | Not Available | Positive | 3340883 - 3341647 | 27460.0 |
| hypothetical protein | SAMN05421747_11432 | Not Available | Positive | 3341681 - 3342130 | 16489.9 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421747_11433 | Not Available | Negative | 3342173 - 3343141 | 37097.0 |
| acyltransferase | SAMN05421747_11434 | Not Available | Negative | 3343146 - 3343898 | 28603.8 |
| cbs domain-containing protein | SAMN05421747_11435 | Not Available | Positive | 3344221 - 3344883 | 25029.9 |
| nad+ kinase | SAMN05421747_11436 | Not Available | Positive | 3344889 - 3345773 | 32288.7 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421747_11437 | Not Available | Positive | 3345862 - 3346662 | 29764.8 |
| undecaprenyl diphosphate synthase | SAMN05421747_11438 | Not Available | Positive | 3346690 - 3347451 | 28916.8 |
| outer membrane protein insertion porin family | SAMN05421747_11439 | Not Available | Positive | 3347530 - 3350085 | 96744.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
