Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fasciclin domain-containing protein | SAMN05421747_11410 | Not Available | Negative | 3312747 - 3314357 | 60613.5 |
| starch-binding associating with outer membrane | SAMN05421747_11411 | Not Available | Negative | 3314371 - 3315843 | 56380.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11412 | Not Available | Negative | 3315855 - 3319115 | 122778.0 |
| fasciclin domain-containing protein | SAMN05421747_11413 | Not Available | Negative | 3319122 - 3321335 | 82869.7 |
| hypothetical protein | SAMN05421747_11414 | Not Available | Negative | 3321521 - 3322657 | 41973.4 |
| laci family transcriptional regulator | SAMN05421747_11415 | Not Available | Positive | 3323013 - 3324020 | 37487.7 |
| atpase components of abc transporters with duplicated atpase domains | SAMN05421747_11416 | Not Available | Positive | 3324096 - 3325718 | 61007.6 |
| hypothetical protein | SAMN05421747_11417 | Not Available | Negative | 3325735 - 3326292 | 20407.6 |
| dna polymerase iii, delta subunit | SAMN05421747_11418 | Not Available | Negative | 3326302 - 3327306 | 37785.6 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN05421747_11419 | Not Available | Positive | 3327454 - 3327924 | 18096.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
