Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421747_113112 | Not Available | Positive | 3296220 - 3296435 | 8629.72 |
| hypothetical protein | SAMN05421747_1141 | Not Available | Positive | 3296791 - 3297477 | 25361.5 |
| protein of unknown function | SAMN05421747_1142 | Not Available | Positive | 3297503 - 3298018 | 19819.1 |
| hypothetical protein | SAMN05421747_1143 | Not Available | Positive | 3298027 - 3298131 | 4116.03 |
| dna-binding protein, histone-like, putative | SAMN05421747_1144 | Not Available | Negative | 3298339 - 3298722 | 14054.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05421747_1145 | Not Available | Negative | 3298927 - 3299826 | 32051.2 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421747_1146 | Not Available | Negative | 3299838 - 3306344 | 234568.0 |
| hypothetical protein | SAMN05421747_1147 | Not Available | Negative | 3306398 - 3308035 | 62907.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_1148 | Not Available | Negative | 3308037 - 3311138 | 114284.0 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05421747_1149 | Not Available | Negative | 3311146 - 3312735 | 59941.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
