Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN05421747_11392 | Not Available | Negative | 3273446 - 3276478 | 115900.0 |
| aspartate carbamoyltransferase catalytic subunit | SAMN05421747_11393 | Not Available | Negative | 3276628 - 3277566 | 34542.0 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN05421747_11394 | Not Available | Negative | 3277576 - 3278127 | 20823.3 |
| hth domain-containing protein | SAMN05421747_11395 | Not Available | Negative | 3278278 - 3278970 | 26813.4 |
| protein of unknown function | SAMN05421747_11396 | Not Available | Negative | 3279016 - 3282045 | 114550.0 |
| Trna-gln | Not Available | Not Available | Positive | 3282306 - 3282379 | Not Available |
| ribose-phosphate pyrophosphokinase | SAMN05421747_11398 | Not Available | Positive | 3282490 - 3283434 | 34326.4 |
| large subunit ribosomal protein l25 | SAMN05421747_11399 | Not Available | Positive | 3283494 - 3284084 | 21749.4 |
| peptidyl-trna hydrolase, pth1 family | SAMN05421747_113100 | Not Available | Positive | 3284184 - 3284750 | 21009.3 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN05421747_113101 | Not Available | Negative | 3284763 - 3286241 | 55402.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
