Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1152102 bp
Thymine Count
1157457 bp
Guanine Count
1159480 bp
Cytosine Count
1152985 bp
Genome Length
4622024 bp
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421747_11382 | Not Available | Negative | 3259554 - 3262553 | 112400.0 |
| bnr repeat-like domain-containing protein | SAMN05421747_11383 | Not Available | Negative | 3262800 - 3264323 | 57564.4 |
| arac-type dna-binding protein | SAMN05421747_11384 | Not Available | Positive | 3264584 - 3265468 | 34369.4 |
| hypothetical protein | SAMN05421747_11385 | Not Available | Negative | 3265476 - 3267143 | 62122.5 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN05421747_11386 | Not Available | Negative | 3267170 - 3268477 | 47749.6 |
| protein tonb, links inner and outer membranes | SAMN05421747_11387 | Not Available | Negative | 3268502 - 3269323 | 29411.3 |
| biopolymer transport protein exbd | SAMN05421747_11388 | Not Available | Negative | 3269389 - 3269796 | 15178.7 |
| biopolymer transport protein exbb | SAMN05421747_11389 | Not Available | Negative | 3269811 - 3270506 | 24802.0 |
| sporulation related domain-containing protein | SAMN05421747_11390 | Not Available | Negative | 3270568 - 3271662 | 39532.8 |
| hypothetical protein | SAMN05421747_11391 | Not Available | Negative | 3271700 - 3273439 | 64558.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
